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Glycolysis, Krebs cycle, and oxidative phosphorylation

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Glycolysis, Krebs Cycle, and Oxidative Phosphorylation

Introduction

Cell respiration is a fundamental metabolic process that occurs in the cells of living organisms, enabling the conversion of biochemical energy from nutrients into adenosine triphosphate (ATP). This article delves into the three pivotal stages of cellular respiration: Glycolysis, the Krebs Cycle, and Oxidative Phosphorylation. Understanding these processes is essential for IB Biology SL students, as they form the cornerstone of cellular energy production and highlight the intricate interplay between different metabolic pathways.

Key Concepts

1. Glycolysis

Glycolysis is the initial pathway of cellular respiration, occurring in the cytoplasm of the cell. It involves the breakdown of one molecule of glucose ($C_6H_{12}O_6$) into two molecules of pyruvate ($C_3H_4O_3$). This ten-step process can be divided into two phases: the investment phase and the payoff phase.

  • Investment Phase: Requires the investment of 2 ATP molecules to phosphorylate glucose and convert it into fructose-1,6-bisphosphate.
  • Payoff Phase: Produces 4 ATP molecules and 2 NADH molecules through substrate-level phosphorylation and the reduction of NAD+.

The net gain from glycolysis is 2 ATP molecules and 2 NADH molecules per glucose molecule. Pyruvate produced in glycolysis serves as the substrate for the Krebs cycle under aerobic conditions.

2. Krebs Cycle (Citric Acid Cycle)

The Krebs Cycle takes place in the mitochondrial matrix and completes the oxidation of organic molecules derived from carbohydrates, fats, and proteins. Each acetyl-CoA molecule, derived from pyruvate via the link reaction, enters the cycle and undergoes a series of reactions that regenerate oxaloacetate, the cycle's starting molecule.

  • Energy Investment: The conversion of pyruvate to acetyl-CoA produces 1 NADH and 1 CO2 per pyruvate molecule.
  • Cycle Reactions: Each turn of the cycle produces 3 NADH, 1 FADH2, and 1 GTP (or ATP) through substrate-level phosphorylation, along with the release of 2 CO2 molecules.

Given that each glucose molecule generates 2 acetyl-CoA molecules, the Krebs Cycle turns twice per glucose, effectively doubling its outputs.

3. Oxidative Phosphorylation

Oxidative phosphorylation encompasses the electron transport chain (ETC) and chemiosmosis, occurring in the inner mitochondrial membrane. This stage utilizes the high-energy electrons carried by NADH and FADH2 to generate ATP.

  • Electron Transport Chain: Electrons are transferred through a series of protein complexes (Complex I to IV) and mobile carriers, releasing energy used to pump protons ($H^+$) into the intermembrane space, creating a proton gradient.
  • Chemiosmosis: The established proton gradient fuels ATP synthase to produce ATP from ADP and inorganic phosphate ($P_i$). This process is driven by the flow of protons back into the mitochondrial matrix.

The final electron acceptor in the ETC is molecular oxygen ($O_2$), which combines with electrons and protons to form water ($H_2O$). Oxidative phosphorylation is responsible for producing the majority of ATP during cellular respiration, approximately 34 ATP molecules per glucose.

Integration of the Three Stages

The three stages of cellular respiration are interconnected, forming a continuous pathway for energy extraction from glucose:

  1. Glycolysis breaks down glucose into pyruvate, yielding ATP and NADH.
  2. Pyruvate is converted to acetyl-CoA, which enters the Krebs Cycle, producing more NADH, FADH2, and ATP.
  3. NADH and FADH2 donate electrons to the ETC, driving oxidative phosphorylation and generating a substantial amount of ATP.

This seamless integration ensures efficient energy production and highlights the cell's ability to harness different stages for maximum ATP yield.

Energy Yield and Efficiency

The complete oxidation of one glucose molecule yields a total of approximately 38 ATP molecules:

  • Glycolysis: 2 ATP (net) + 2 NADH
  • Link Reaction: 2 NADH
  • Krebs Cycle: 2 ATP + 6 NADH + 2 FADH2
  • Oxidative Phosphorylation: Approximately 34 ATP from NADH and FADH2

However, the actual ATP yield may vary due to the efficiency of mitochondrial transport systems and the usage of the proton gradient for other cellular processes.

Regulation of Cellular Respiration

Cellular respiration is tightly regulated to meet the cell's energy demands and maintain homeostasis. Key regulatory points include:

  • Hexokinase: Catalyzes the first step of glycolysis, inhibited by its product, glucose-6-phosphate.
  • Pyruvate Dehydrogenase: Controls the conversion of pyruvate to acetyl-CoA, regulated by product inhibition from NADH and acetyl-CoA.
  • Isocitrate Dehydrogenase and α-Ketoglutarate Dehydrogenase: Enzymes in the Krebs Cycle, activated by ADP and inhibited by ATP and NADH.

These regulatory mechanisms ensure that ATP production aligns with the cell's energy requirements, preventing unnecessary metabolic flux.

Fermentation: An Anaerobic Alternative

In the absence of oxygen, cells can undergo fermentation to regenerate NAD+ from NADH, allowing glycolysis to continue:

  • Lactic Acid Fermentation: Pyruvate is reduced to lactate, regenerating NAD+. Common in muscle cells during intense exercise.
  • Alcoholic Fermentation: Pyruvate is converted to ethanol and CO2, regenerating NAD+. Occurs in yeast and some plant cells.

Fermentation yields only 2 ATP molecules per glucose, highlighting its lower efficiency compared to aerobic respiration.

ATP Production Summary

The efficiency of ATP production through cellular respiration can be summarized as follows:

Stage ATP Yield Other Products
Glycolysis 2 ATP (net) 2 NADH, 2 Pyruvate
Link Reaction 0 ATP 2 NADH, 2 Acetyl-CoA, 2 CO2
Krebs Cycle 2 ATP 6 NADH, 2 FADH2, 4 CO2
Oxidative Phosphorylation 34 ATP Water and Heat
Total 38 ATP

Comparison Table

Feature Glycolysis Krebs Cycle Oxidative Phosphorylation
Location Cytoplasm Mitochondrial Matrix Inner Mitochondrial Membrane
Oxygen Requirement Anaerobic Requires Oxygen indirectly Aerobic
ATP Yield 2 ATP (net) 2 ATP per glucose 34 ATP per glucose
Electron Carriers Produced 2 NADH 6 NADH, 2 FADH2 Uses NADH and FADH2
End Products 2 Pyruvate 4 CO2 Water and ATP

Summary and Key Takeaways

  • Cellular respiration comprises Glycolysis, the Krebs Cycle, and Oxidative Phosphorylation.
  • Glycolysis breaks down glucose into pyruvate, yielding ATP and NADH.
  • The Krebs Cycle further oxidizes acetyl-CoA, producing more NADH, FADH2, and ATP.
  • Oxidative phosphorylation utilizes the electron transport chain and chemiosmosis to generate the majority of ATP.
  • Understanding these processes is essential for comprehending cellular energy metabolism in IB Biology SL.

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Examiner Tip
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Tips

Mnemonic for Krebs Cycle: To remember the main products of the Krebs Cycle, use the phrase "Can I Keep Selling Sex For Money, Officer?" which stands for CO2, Isocitrate, α-Ketoglutarate, Succinyl-CoA, Succinate, Fumarate, Malate, and Oxaloacetate.

ATP Yield Formula: Remember that each NADH yields 3 ATP and each FADH2 yields 2 ATP during oxidative phosphorylation. This helps in accurately calculating the total ATP produced.

Visual Aids: Utilize diagrams of the electron transport chain and the Krebs Cycle to visualize the flow of electrons and the generation of ATP. Visual memory can enhance retention and understanding.

Did You Know
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Did You Know

1. Nobel-Winning Discovery: The Krebs Cycle, also known as the Citric Acid Cycle, was discovered by Sir Hans Krebs in 1937, earning him the Nobel Prize in Physiology or Medicine in 1953. This discovery was pivotal in understanding cellular respiration and energy production.

2. ATP Powerhouse: Oxidative phosphorylation is responsible for producing approximately 34 ATP molecules from a single glucose molecule, making it the most efficient stage of cellular respiration and the primary source of energy for most cellular activities.

3. Alternative Pathways in Pathogens: Some bacteria and parasites have unique variations of the Krebs Cycle, allowing them to survive in diverse and extreme environments. This adaptability is a target for developing antimicrobial therapies.

Common Mistakes
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Common Mistakes

Mistake 1: Confusing the locations of the metabolic pathways.
Incorrect: "Glycolysis occurs in the mitochondria."
Correct: "Glycolysis takes place in the cytoplasm."

Mistake 2: Miscalculating the total ATP yield from cellular respiration.
Incorrect: "Each glucose molecule produces 50 ATP."
Correct: "A single glucose molecule typically yields about 38 ATP through cellular respiration."

Mistake 3: Overlooking the role of electron carriers like NADH and FADH2 in oxidative phosphorylation.
Incorrect: "ATP is produced directly in the Krebs Cycle."
Correct: "ATP in the Krebs Cycle is produced via substrate-level phosphorylation, while NADH and FADH2 contribute to ATP generation in oxidative phosphorylation."

FAQ

What is the primary purpose of glycolysis?
Glycolysis breaks down one molecule of glucose into two molecules of pyruvate, producing a net gain of 2 ATP and 2 NADH molecules, which are essential for further stages of cellular respiration.
How many ATP molecules are produced in the Krebs Cycle per glucose molecule?
The Krebs Cycle produces 2 ATP molecules per glucose molecule through substrate-level phosphorylation, along with 6 NADH and 2 FADH2 molecules.
Where does oxidative phosphorylation occur within the cell?
Oxidative phosphorylation takes place in the inner mitochondrial membrane, where the electron transport chain and ATP synthase are located to generate ATP.
What role do NADH and FADH2 play in cellular respiration?
NADH and FADH2 act as electron carriers, transporting high-energy electrons to the electron transport chain, where their energy is used to produce ATP through oxidative phosphorylation.
What happens to pyruvate during fermentation?
During fermentation, pyruvate is converted into lactate or ethanol and CO2, regenerating NAD+ to allow glycolysis to continue in the absence of oxygen.
How is ATP generated in oxidative phosphorylation?
ATP is generated in oxidative phosphorylation through the flow of protons back into the mitochondrial matrix via ATP synthase, driven by the proton gradient established by the electron transport chain.
2. Continuity and Change
3. Interaction and Interdependence
4. Form and Function
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